The simplest definition of salinity is how salty the ocean is. Easy enough, right? Why is this basic property of the ocean so important to oceanographers? Well, along with the temperature of the water, the salinity determines how dense it is. The density of the water factors into how it circulates and mixes…or doesn’t mix. Mixing distributes nutrients allowing phytoplankton (and the rest of the food web) to thrive. Globally, salinity affects ocean circulation and can help us understand the planet’s water cycle. Global ocean circulation distributes heat around the planet which affects the climate. Climate change is important to oceanographers; therefore, salinity is important to oceanographers.

Spring Salinity Climatology for the Chesapeake

Salinity doesn’t vary that much in the open ocean, but it has a wide range in the coastal ocean. The coast is where fresh water from rivers and salt water in the ocean mix. Measurements of salinity along the coast help us understand the complex mixing between fresh and salty water and how this affects the local biology, physics, and chemistry of the seawater. However, the scope of our measurements is very small. Salinity data is collected by instruments on ships, moorings, and more recently underwater vehicles such as gliders. While these measurements are trusted to be very accurate, their spatial and temporal resolution leaves much to be desired when compared to say daily sea surface temperature estimated from a satellite in space.

So, why can’t we just measure salinity from a satellite?Well, it’s not as simple, but it is possible. NASA’s Aquarius mission http://aquarius.nasa.gov/ which was launched this past August is taking advantage of a set of three advanced radiometers that are sensitive to salinity (1.413 GHz; L-band) and a scatterometer that corrects for the ocean’s surface roughness. With this they plan on measuring global salinity with a relative accuracy of 0.2 psu and a resolution of 150 km. This will provide a tremendous amount of insight on global ocean circulation, the water cycle, and climate change. This is great new for understanding global salinity changes. What about coastal salinity? What if I wanted to know the salinity in the Chesapeake Bay? That’s much smaller than 150 km.

That’s where my project comes in. It involves NASA’s MODIS-Aqua satellite (conveniently already in orbit: http://modis.gsfc.nasa.gov/), ocean color, and a basic understanding of the hydrography of the coastal Mid-Atlantic Ocean. Here’s how it works: we already know a few things about the color of the ocean, that is, the sunlight reflecting back from the ocean measured by the MODIS-Aqua satellite. We know enough that we can estimate the concentration of the photosynthetic pigment chlorophyll-a. So not only can we see temperature from space, but we can estimate chlorophyll-a concentrations too! Anyway, there are other things in the water that absorb light besides phytoplankton and alter the colors we measure from a satellite.

Spring Salinity Climatology for the Mid-Atlantic

We group these other things into a category called colored dissolved organic material or CDOM. CDOM is non-living detritus in the water that either washes off from land or is generated biologically. It absorbs light in the ultraviolet and blue wavelengths, so it’s detectable from satellites. In coastal areas especially, its main source of production is runoff from land. So, CDOM originates from land and we can see a signal of it from satellites that measure color. What’s that have to do with salinity?

You may have already guessed it, but water from land is fresh. So, water in the coastal ocean that is high in CDOM should be fresher than surrounding low CDOM water. Now we have a basic understanding of the hydrography of the coastal Mid-Atlantic Ocean, how it relates to ocean color, and why we need the MODIS-Aqua satellite to measure it. So, I compiled a lot of salinity data from ships (over 2 million data points) in the Mid-Atlantic coastal region (Chesapeake, Delaware, and Hudson estuaries) and matched it with satellite data from the MODIS-Aqua satellite in space and time. Now I have a dataset that contains ocean color and salinity. Using a non-linear fitting technique, I produced an algorithm that can predict what the salinity of the water should be given a certain spectral reflectance. I made a few of these algorithms in the Mid-Atlantic, one specifically for the Chesapeake Bay. It has an error of ±1.72 psu and a resolution of 1 km. This isn’t too bad considering the range in salinity in the Chesapeake is from 0-35 psu, but of course there’s always room for improvement. Even so, this is an important first step for coastal remote sensing of salinity. An algorithm like this can be used to estimate salinity data on the same time and space scale as sea surface temperature. That’s pretty useful. The folks over at the NOAA coastwatch east coast node thought so too. They took my model for the Chesapeake Bay and are now producing experimental near-real time salinity images for the area. The images can be found here: http://coastwatch.chesapeakebay.noaa.gov/cb_salinity.html. They will test the algorithm to see if it is something they want to use

Climatologies of salinity for all of my models can be downloaded here: http://modata.ceoe.udel.edu/dev/egeiger/salinity_climatologies/.

I view this project as an overall support of the NASA Aquarius mission by providing high resolution coastal salinity estimates that are rooted in in situ observations. I hope this information proves to be useful for coastal ocean modeling and understanding the complex process that effect the important resource that is our coasts.

Summer is an especially busy time for research vessels. The UNOLS fleet is making increasing use of containerized portable lab vans to shave some time and effort off of offloading the science party from one cruise and loading up the next mission and their gear. They also increase the flexibility of the research vessels by giving them the option to add additional science capabilities and facilities to vessel users. Options include adding:

• Dry Labs
• Wet Labs
• Isotope Labs
• Clean Labs
• Cold Labs
• Additional Berthing

This is a time lapse that we shot of the RV Hugh R Sharp returning from a multi-week scallop survey, unloading one lab van and then loading two more fresh ones before fueling up (both diesel and food) and departing on the next mission. Enjoy!

We had a gentleman named Matthew Vest come to the GVis lab the other day to show off his do-it-yourself creation. He was looking for information on whether he might be able to showcase it at the upcoming Coast Day 2011 event that happens each year on the second Sunday of October here at the Hugh R Sharp campus in Lewes.

Matthew has done something that most of us dream about doing, something many of us say we’re going to do, and that same something that most of us never get off our duffs and actually do. He has taken a 1985 Chevy S-10 truck, removed the gasoline engine and tank, and replaced them with an electric drive motor (from a fork lift he says) and a bed full of 6 volt lead acid batteries (aka ‘golf cart batteries’ – 24 in total). The conversion took him about 2 years to complete and cost approximately $10,000 dollars but now he is the proud owner (and creator) of an all-electric vehicle that will to approximately 40-60 miles on a charge.

Matthew Vest' Electric Truck

Matthew went out of his way to select “Deka” batteries to power his creation, which he says are 100% recyclable. Each of the 24 batteries weighs in at 60 lbs, for a total battery weight of about 1450lbs. These batteries are wired in series to generate the 144 volts DC that power the Warp-9 electric motor that replaces the gas engine. There is one 12 volt battery which is used to power the stock lights, wipers and horn.

Chevy S10 - Batteries in the Back

A Curtis 1231c controller is like the brains of the truck, controlling the power flow. A Zivan ‘smart charger’, which runs on standard 110v, sits behind the driver seat. When fully discharged, the batteries take about 10-12 hours to recharge. The only sound that the truck makes when it is running is the sound of the add-on vacuum pump that is also under the hood. It creates the vacuum that assists with the stock braking system of the truck.

Chevy S10 - Under the Hood

Matthew is hoping to touch base with some of the researchers at UD that are involved in the V2G or “Vehicle To Grid” project so that he can assess whether his S10 can also be integrated with the power grid. For more information on V2G and GIEV’s (Grid Integrated Electric Vehicles) you can read more on the Q&A section on the V2G site.

We asked Matt how he got started with the project and he said it just took some research online, a couple of “how to retrofit your gas vehicle into an electric vehicle” books, and some very helpful people on a few of the EV forums. We salute Matt for what turned out to be an excellent EV refit and for his consideration of the environment when he selected the batteries and materials for his electric vehicle project. Well done!

The ORB Lab was having a meeting in the GVis Lab this week and, as usual, the East Coast US 8-Day Averaged Sea Surface Temperature overlay was up on the screens. Dr. Oliver pointed to the screen and noted that there was a path cutting across the Gulf Stream that was cooler than usual and that it was probably due to upwelling and mixing from hurricane Katia. Sure enough, we loaded up a layer showing Katia’s track and they lined up.

Katia SST Trail

We then checked to see if there was anything noticeable on the East Coast US 8-Day Average Chlorophyll layer and you can see what appears to be a slight bloom in chlorophyll along the track as well (slightly lighter blue).

Katia Cholorophyll Trail

Another neat view is the markedly cooler water that you flowing into the bays from the increased river discharge that resulted from the large amounts of rain dropped by hurricane Katia and tropical storm Lee as they passed through.

Cold river water 20110913

These layers and several others are processed and uploaded daily and made available via the Orb Lab website in the Public Access section. They are exposed via Google Maps interfaces as well as Google Earth embedded views and linkable KMZ file formats. Neat stuff!

Welcome Home Flat Samantha!

Samanthas and Astronaut Greg Johnson

Everything has finally come full circle and Flat Samantha is once again re-united with her creator Samantha. Calling @FlatSamantha‘s trip a “circle” might be a bit of a misnomer however as she has had a wild adventure over the last couple of months. Her journey started in April when young Samantha found out that I was selected to attend the #NASATweetup for the final launch of the space shuttle Endeavour (#STS134). Samantha (and all the rest of the students in the lab) were disappointed that they couldn’t come with me to watch this historic launch, and Samantha took matters (and scissors and markers) into her own two hands and created a flat adventurer that she named Flat Samantha. She asked me if Flat Samantha could ride with me to the Endeavour launch and go up in the shuttle to the International Space Station. I would have loved to say “yes” but I had to inform Samantha that time was too short and that I could only take her down to watch the shuttle launch, but that I would take lots of pictures of her during this adventure and let her share them via a Twitter account that was set up for her (after all, she was going down to a NASATweetup – how’s a girl to tweet if she doesn’t have an account ;?).

I emailed Stephanie Schierholz that I would like to bring along another #NASATweetup attendee and that she wouldn’t take up any extra space. Without batting an eye Ms. Schierholz said “no problem, I’ll have a #NASATweetup badge waiting for her as well”.

FlatSamantha STS134 NASATWeetup Badge

The original launch date for the shuttle was adjusted forward as there was a conflict between when the Endeavour would be at the ISS and when the Soyuz 25S capsule would be there with some time sensitive experiments. It just so happened that the new launch date fell during my sons spring break period at school, so we scheduled a family vacation to Orlando prior to the launch and had a blast sharing the road trip down and the theme park adventures with Flat Samantha prior to the new launch date. I took her over to the Kennedy Space Center for the #STS134 #NASATweetup where we enjoyed the many presentations that the fine people at NASA had arranged for us on day #1 and then came back for what ended up being a scrubbed launch on day #2 (see: “STS-134 NASATweetup is only half over“).

We sat in the tent waiting for the hundreds of thousands of other disappointed spectators that were parked outside the Kennedy Space Center to head home after the launch scrub, knowing that it would be a couple of hours at least before the roads would be passable. As we chatted amongst ourselves, I started talking with Beth Beck and she asked me about the back story on my flat companion. I told her about Samantha and how she would like to have seen Flat Samantha go into space and that I could only promise to get her to the NASATweetup event to watch the launch. Ms. Beck said that since the launch was scrubbed, that there might be a possibility to fulfill Samantha’s wishes and that she would get back to me. Sure enough, a few days later I got an email from her saying that one of the astronauts – Gregory Johnson (aka @Astro_Box) said that he would do what he could to get @FlatSamantha into space. True to his word, we received a picture from space of one @FlatSamantha in the cupola of the International Space Station.

Flat Samantha in the ISS Cupola (photo by Gregory Johnson)

Upon the Endeavour’s return, Flat Samantha was escorted to a couple of other NASA Tweetup events including the #NASATweetup for the Sophia Telescope, the @NASAJPL Tweetup by @Schierholz and even the historic landing of the space shuttle Atlantis #STS135 with @BethBeck. Being flat and portable makes it much easier to get invited to some pretty awesome events it seems.

The title of this post is “NASATweetup Mission Accomplished” because the journey home to creator Samantha was accomplished this past week. The journey home was not via a FedEx envelope or the like, however. Flat Samantha was escorted home and hand-delivered by none other than astronaut Gregory Johnson while he was on the east coast giving a mission debriefing to NASA empoyees at NASA HQ in DC. Samantha, her parents and myself were invited to attend the debriefing and to meet with @Astro_Box for some photos following the debriefing by the ever awesome Beth Beck. When the University of Delaware’s ORB Lab students (who were anxiously following @FlatSamantha’s adventure) found out about the trip, they asked if they could come too. I asked Ms. Beck whether that was possible and not only did she say “yes” but she provided the entire group with reserved up-front seating for the debrief!

NASA HQ Debrief (photo by Beth Beck)

I want to give a heart-felt thank you to Stephanie Schierholz and Beth Beck for allowing us all to join @FlatSamantha in her whirlwind adventure, both via Twitter and in person. I would also like to thank Gregory Johnson for making not only one little girls wish come true by bringing her flat proxy into space, but for also taking time out of his incredibly busy schedule to bring that excitement to our small group of students and the rest of the world. The employees and representatives of NASA embody the compassion, the “can do” attitude and the educational and outreach expertise that the rest of us should pay close attention to. We are all honored to have been included in these adventures and their memories that we will carry with us for a lifetime. Rocket On NASA!

Group Photo with Greg Johnson and Flat Samantha (photo by Beth Beck)

PS – All of the Flat Samantha #STS134 #NASATweetup adventure photos have been uploaded to the Flat Samantha Ocean Bytes media gallery – enjoy!

Luckily Blaise Sheridan is not afraid of heights, as he climbs up the UD 2-megawatt wind turbine for the second time. With his Master’s thesis revolving around wind energy, he is one of only four people from UD certified to climb the turbine. Although there is an elevator (more technically termed a personnel or ‘man’ lift), it can only be used by those who take a more intensive 4-day training course. Instead, a 2-day Fall Protection/Competent Climber class was taken by two facilities employees (Don Smith and Rodney McGee), as well as two UD students (Blaise and DeAnna Sewell). With this course under their belt, they can climb the ladder to the top of the 256-foot-tall-turbine. For their safety, they are always connected to a guide wire that clips onto the cable grab of each climbers harness. The cable ensures that if a climber falls they will only drop less than a foot.

 This goal of this trip was to string up 3 cables to install bat microphones. The microphones will allow researchers to see how often bats pass around the turbine. This anticipated one-day job ended up taking about 2.5 days due to lightning and the large amount of on site planning that needed to take place. With the help of a Gamesa contractor, Blaise and Rodney were able to install the research equipment while the contractor performed routine maintenance and provided his expert guidance.

The turbine is currently producing more electricity than projected, although how much more is still being studied. On average, it produces more energy than the university needs, which makes the excess available to the town!

Inside the nacelle, the bus sized structure on the top of the tower where all the interesting mechanical and electrical components are housed, Blaise notes,  “It must be at least 120 degrees” from the waste heat given off by the electrical transformers, not to mention all the gearboxes, friction and the fact that heat rises up the turbine. But, outside, on top of the nacelle, there’s enough airflow to cool you off! Blaise admits it can be very tiring to climb but the incredible view from the top is worth it. He discloses his favorite part is to watch the wake off the boats coming into Roosevelt Inlet. With the hope of additional renewable energy options in the future,  “It’s still very novel for a university to have this turbine and its been a once in a life time experience…one to check off the bucket list.  Not to mention it’s a great bar story.”

I was showing the students how to operate the “birdcam” so they can use it to record a series of stills to create a time lapse video of an upcoming research cruise on the RV Hugh R Sharp. We left the birdcam in the corner and let it click away all day, shooting a new still every minute and the video above is the resulting masterpiece. It is embedded from “The UD ORB Lab” channel on YouTube.

You can learn more about the “birdcam” in a previous post about “Timelapse Video on the Cheap“. The GVis Room pictured above is the “Global Visualization Room” that was described in the post “How to Construct a Global Visualization Lab“.

Thanks to the ORB Lab crew for sharing!

This is a gallery of the launch photos that I took in the ~20 seconds that we had between ignition and the space shuttle Endeavour disappearing into the clouds. I’ll set up an outside gallery of all of the 300+ photos that I took in the coming week or so. I hope you enjoy them as much as I am.

(The image above is dynamic and zoomable, play around with it some. Mouse over it and use your scroll wheel, click and drag around on the image, or click the plus and minus buttons, even go full screen with the button on the lower-right-hand corner – have fun with it!)

One of the challenges of taking photos of special events and places is that they always look so small and lacking in visual acuity and detail. You take a picture and then later, when you’re looking at it, you feel underwhelmed that it just doesn’t capture the clarity that you remember seeing.

Two technologies that I cobbled together to create the zoomable picture above of the Endeavour (STS-134) on the launch pad are Microsoft ICE (Image Composite Editor) and DeepZoom to tile and create javascript that allows you to zoom in and out of the image to enjoy much more detail. You can learn more about Microsoft ICE via this HD View blog posting, including details on what it can do as well as download links (it’s free!). I used my digital camera to zoom into the shuttle while it was on the launch pad post RSS shield retraction and took a matrix of photos, making sure that each photo overlapped with the others a little bit so that ICE could stitch them into one large hi-res photo. Since we’re limited in the number of pixels we can display on a screen, I leveraged DeepZoom technologies to break the image into a series of sub-images and to create javascript to swap in higher-resolution tiles as you zoom into the image. Similar to what you find when you zoom into a Google Map image or the like.

Microsoft has made it quite easy to automagically create DeepZoom images (based on SeaDragon technology) via their Zoom.it site. All I had to do was upload the composited image that I’d created using ICE to a web server, feed Zoom.it the URL of the large graphic image file and then copy the embed code from the results and paste them into this post after the file had been processed. The resulting javascript and tiles that were created are hosted on their site, so I didn’t even need to include them in my image file holdings.

I hope this helps in two ways:
A) Appreciate the awesome site that we were seeing at the STS-134 NASATweetup
B) You now know how to fish (ie: how to create cool visualizations like this). Have at it!

ps – If you want to pull down the full hi-res image that was used to create this so you can print out an awesome poster of the shuttle on the launch pad, you can get it here. Enjoy!

I took as many photos as I could during the Endeavour launch yesterday morning as fast as my camera would allow. Here is a time lapse of the photos taken before it disappeared into the clouds. I uploaded it to YouTube at 1080p, so make sure to go full-screen with it. Enjoy!

Update: Just found a link to a video that @AVWriter posted -- crank up the subwoofer and enjoy the launch from the same vantage point that we had!

On Sunday we had the unique opportunity via the STS-134 #NASATweetup of being able to take pictures of the space shuttle Endeavour from about 600 yards away while the RSS shield was “retracted”. RSS stands for Rotating Service Structure and it is rotated away from the shuttle prior to fueling and subsequent launch. While I was busy snapping a gazillion pictures, I set up my el-cheapo digital video camera on the tripod and recorded the ~20 minute process. Below is a fast forwarded time lapse, squeezing the entire process into just over a minute. Enjoy!

Dr. Art Trembanis’ Coastal Sediments, Hydrodynamics & Engineering Lab (CSHEL) has been pretty busy lately. Not long ago I did a post about the prototype sub-bottom profiler section that he added to his Autonomous Underwater Vehicle (AUV) (see: Sub-Bottom Profiling using an AUV). I was down at the NASATweetup for the Endeavour (STS-134) launch not long ago and I got chatting with some folks from NASA’s Open Goverment Initative about the NEEMO 15 project (NEEMO stands for “NASA Extreme Environment Mission Operations“) and we discussed UD’s involvement.

It takes a village of roboticists to run a successful AUV campaign

When I emailed Dr. Trembanis upon my return to Delaware, he emailed me back with instructions to browse to UNCW’s Life Support Buoy live webcam above the Aquarius Reef Base. Sure enough, he was there aboard the RV George F. Bond monitoring his Gavia Scientific AUV as it acoustically mapped the Conch Reef around the Aquarius as a precursor robotic mission for NEEMO 15.

Go Pro Hero Attached to the AUV

Here is video footage shot by an off-the-shelf HD Go Pro Hero digital video camera that was attached to the AUV:

The mapping mission ran for 4 days and covered approximately 100km, resulting in about 15Gigabytes of raw data. Here’s an overview map of the mission.

Aquarius NEEMO 15 precursor survey

Many thanks to Dr. Trembanis for the video and imagery to go along with the story. Be sure to visit NASA’s NEEMO site to learn more about the mission and what’s to come. Visit the CSHEL site to learn more about the research that’s going on there and to see other cool video and image products that they’re producing.

I’m back from the Kennedy Space Center and the first half of the STS-134 NASATweetup. We got through most of the activities slated for Day #1 – which included meeting the ~149 other #NASATweetup attendees, a demo of the Extravehicular Mobility Unit (EMU) and Mark III spacesuits, and talks by Dana Hutcherson (flow director), Tara Ruttley (ISS associate program scientist) and astronaut Clay Anderson (@Astro_Clay). They really rolled out the red carpet for us!

@CPUGuru, @FlatSamantha and @Astro_Clay

The second half of the day involved visits to the Shuttle Landing Facility and the Mate-Demate Device (big honkin’ crane and assembly to lift the shuttle onto and off-of the 747 that carries it), the Vehicle Assembly Building (the large picture behind us in the picture above) – also known as the “world’s largest single story building” in which they work on and assemble the shuttle, booster rockets etc. The last part of Day #1 was supposed to be a site visit to the shuttle itself to watch the retraction of the Rotating Service Structure (or RSS) but a rather nasty storm front presented itself and all sorts of dark clouds, rain and lightning ensued.

The Lightning Storm

Retraction of the RSS was delayed from its original 7:00pm time to much later in the evening, so we missed being able to get up close and personal with the shuttle. By the time we arrived for “Launch Day” the following morning, the RSS had already been retracted and the fuel tanks were being filled with liquid oxygen, so we were unable to get any closer than the press site almost 3 miles away.

On Day #2 we had a group picture taken by the countdown clock and talks by astronauts Ricky Arnold (STS-119 Discovery) and Leland Melvin (@Astro_Flow – now associate director for Education at NASA). We also had a talk by Daire McCabe – a designer at Lego followed by a weather/launch update by Lt. Col. Patrick Barrett of the 45th Weather Squadron.

We all went out to the roadside in front of the Vehicle Assembly Building (VAB) to watch the caravan carrying the astronauts to Launch Pad 39A go by and wish them well, however the vans came, stopped, and turned back around (a first we’re told). Apparently a power coupling unit was not functioning on the shuttle and they scrubbed the launch. We were all a tad disappointed, but I heard a good quote along the lines of “it’s better to be on the ground wishing you were in the air than to be in the air and wishing you were on the ground”.

Caravan Carrying the Astronauts

The current status is that they are in the process of replacing the faulty power coupling unit and that the earliest possible launch date is May 10th. Both @FlatSamantha and I (@cpuguru) plan on heading back down to KSC as soon as they tell us a definitive launch date. We’ll be sure to take some awesome pictures and will keep you informed once the second half of this #NASATweetup resumes. For a good timeline of the adventures of @FlatSamantha, be sure to follow her on her Twitter page, where she’ll keep you informed and upload pictures of what’s going on right then. Until then, we’re on hot stand-by, our bags are packed and we’re anxiously awaiting the good news that the launch is a go.

Samantha and her friend Flat Samantha

Flat Samantha is in the house! I was contacted by young Samantha (pictured left – the non-flat one) to see if I had room for Flat Samantha to ride with us to the Kennedy Space Center in Florida when we embark for the NASA Tweetup at the Space Shuttle Endeavour (STS-134) launch on April 29th. Today we met up with her and her parents and got instructions on how to take care of Flat Samantha.

Samantha has provided meticulous training to Flat Samantha and has crafted a first-class space suit along with a helmet to help her breath in space should the opportunity present itself.

During our pre-flight briefing, I gave her the run-down on what the travel plans will be. I promise to take good care of our new travel companion and will post pictures at every major step in our journey. Thanks for entrusting us with your friend Samantha! We’ll be sure to take good care of her and will return her to you safely when this adventure is over.

Flat Samantha is following the footsteps of some of her other flat siblings, including the original “Flat Stanley” who visited twice: once in 2002 when he went into space and did a 14-day mission on the space shuttle Endeavour and again in 2011 when he visited NASA HQ courtesy of Beth Beck.  Other flat adventurers include “Flat Paxton” and “Flat David“, who also had the opportunity to visit NASA.

Flat Samantha will be tweeting about her adventures at the #NASATweetup - you can follow her tweets via @FlatSamantha as well as mine at @CPUGuru. Welcome to the adventure Flat Samantha!

Ocean Bytes AstroTweeter @cpuguru

It’s official – I’m heading to Kennedy Space Center in sunny Florida for the Space Shuttle Endeavour (STS-134) launch as part of what they call a “#NASATweetup”. I follow @NASA via my personal Twitter account – @cpuguru – and when they announced that they were accepting applicants for the 150 spots that could gain back-stage access to the Space Shuttle Endeavour’s final launch, I beat feet over to the site and entered the contest. Apparently there were over 4,000 applicants for these openings from around the world. It blew my mind when I finally got the email from NASA saying that I was selected. I am deeply honored to be included in this auspicious event.

What is a “NASA Tweetup” you ask? Well, according to the NASA Tweetup page:

“A Tweetup is an informal meeting of people who use the social messaging medium Twitter. NASA Tweetups provide @NASA followers with the opportunity to go behind-the-scenes at NASA facilities and events and speak with scientists, engineers, astronauts and managers. NASA Tweetups range from two hours to two days in length and include a “meet and greet” session to allow participants to mingle with fellow Tweeps and the people behind NASA’s Twitter feeds.”

STS-134 Patch

A list of the ~150 confirmed attendees of the #NASATweetup for space shuttle Endeavour’s launch can be found via the @NASATweetup/sts-134-launch list. A fellow attendee, @ChrisCardinal, has setup a comprehensive blog site that he’s using to post information pertinent to the launch and the STS-134 Tweetup at http://134tweetup.com. It’s been quite useful for tracking some of the behind-the-scenes information about the shuttle launch, as well as updates such as the delay of the launch from April 19 to a new (unless it changes again) April 29 launch date due to a overlap issue it would have with docking with the International Space Station by a Russian Progress supply vehicle. My understanding is that the delay came about because the Russian vehicle needed to be docked to the ISS during the same time frame as the Endeavour’s 14-day mission would have fallen. Apparently there are two docking ports on the ISS and the two vehicles could theoretically have been docked simultaneously, but I believe that process has not yet been fully vetted and approved yet so the safer alternative of delaying the shuttle launch was selected.

I’m taking you with me!

The bad news is that while I won the lottery to attend the NASA Tweetup, I am unable to physically take anybody else with me. The GOOD news is that doesn’t mean that you can’t come with me virtually. I’m brainstorming on what kinds of equipment I can pull together that would allow me to share as much of this experience with you as I can through the magic of modern portable electronics. I want to cobble together a high-def webcam and perhaps a tablet or laptop so that I can record (and maybe live stream) my adventure ala Hat Cam Guy (aka Joel Glickman). Since I don’t have an iPhone to hot-glue to my ball cap, I might have to rely on the generosity of others to help me pull this off. If you have some equipment and/or resources you’d like to donate to the cause please let me know by emailing me at 134Tweetup@oceanic.udel.edu.

Q&A for NASA

If you look in the menu above, you’ll see that I added a page called “Q&A for NASA” so that school kids (and adults ;?) can post questions that they’d like me to try to get answers for while I’m down there. If you have a question that you’d like me to try and find an answer to, please feel free to add it in a “comment” to the page and I’ll do my best to get it answered while I’m down at the Kennedy Space Center.

Government Shutdown?

Now we are apparently going to be playing the “chase the launch date” game as we worry about the possible impact that a US Government shutdown would have on the launch due to the lack of a budget from Congress. I’ve been following the Twitter hashtag “#NASATweetup” and keeping a watchful eye on what the latest rumors are as to whether the mission will be delayed from its current April 29 launch date if funding isn’t allocated to keep governmental operations rolling. I’m crossing my fingers and hoping that Congress can get matters worked out.

A HUGE shout-out to Tammy!

I’ve been emailing back and forth with our awesome Marine Public Education Office team about this incredible opportunity to reach out and help educate and include kids in this adventure. I mentioned that it would be cool to include more of a space theme in the Ocean Bytes header image and in the time it took me to drive home I had the awesome header image that you see above in my inbox from our incredibly talented Tammy Beeson. Tammy ROCKS!

I was minding my own business, walking between Smith Lab and Cannon Lab buildings when what to my wandering eyes should appear but a reeeallly long stretched out Gavia Scientific AUV. My geek radar started going off and I just HAD to investigate exactly what was inside these newly milled sections of hull.

Gavia Scientific AUV with a recent addition

I invited myself into the lab and started asking some questions. It turns out that these new sections contain a prototype Teledyne Benthos Chirp III sub-bottom profiler that was specially designed to integrate with an AUV. Dr. Art Trembanis’ CShel lab and Val Schmidt from the University of New Hampshire’s Center for Coastal and Ocean Mapping were working with UTEC Survey Inc. to successfully integrate and test this new addition to the AUV’s sensor lineup. I cornered Nick Jarvies from UTEC and he gave me the run-down on the new addition (thanks Nick!):

What is a “sub-bottom profiler” you ask? Per the Wikipedia entry, it is a “powerful low frequency echo-sounder…developed for providing profiles of the upper layers” of the ocean floor. In the case of the Chirp III, probably in the range of 10-20kHz. Per Dr. Trembanis “Data is stored in an onboard Compact Flash card in an industry standard SEG-Y format.  The advantage of a chirp signal over a single frequency output is that through chirp demodulation of the returning signal one can get a better compromise between penetration and resolution.  The lower the frequency the greater the penetration but the less the resolution (and vice versa for high frequency) so a chirp signal which modulates from a low to high frequency provides penetration and resolution.  All of this depends to a great degree on the kind of bottom material one is trying to penetrate.”

Internal view of the Benthos Chirp III AUV SBP

The advantages of an AUV-based sub-bottom profiler (also per Art Trembanis) are:

• We remove lots of water column data that would normally be unwanted and has to be removed/ignored from the record.
• Because we can precisely follow the terrain near the bed or hold a constant depth well below the surface we can remove/diminish effects of waves that cause a ship to bob up and down.
• We are able to do higher resolution characterization of the subsurface in greater water depths since otherwise from a surface ship you would have to use a lower frequency system to penetrate through the water column.
• Because of the precise navigation of the AUV we can get very tight line spacing and precision following of features (i.e. pipeline routes) which allows us to provide better data more efficiently.

Thanks to everybody for taking time to talk on camera and for answering my questions!

Some time ago I was asked what would it take to get a live webcam feed of the osprey nest next to our Marine Operations Building. We have an osprey couple – Ricky & Lucy – and people love to check in on them throughout the summer months when they come home to Lewes.

I thought I’d share the software and hardware lineup that I selected to do the job and explain some of my choices. The equipment I ended up ordering was:

• Sony SNC-RZ30N PTZ (pan + tilt + zoom) IP Webcam (~$1,100)
• Dotworkz D2 Outdoor Enclosure with heater/blower (~$500)
• Videolarm APM3 Pole Mount Bracket (PDF) (~$60)
• WebcamXP network camera monitoring, streaming & recording software (~$99)
• Some sort of intermediary computer to run the WebcamXP software
• 100′ Outdoor Extension/Power Cord
• 100′ Underground Double-shielded Cat5 Network Cable
• Uninterruptable Power Supply (UPS)
• Desiccant packs, Velcro Tape & a Plastic Container
• RainX and Marine Silicone RTV

Why I picked what I did

We wanted to mount the webcam on an existing antenna tower next to the Marine Operations Building, thus the pole mount bracket. The webcam needed to have a short shopping list of features – including:

• Stand-alone operation and a physical network jack for IP (network) streaming – we didn’t want to potentially impact building wifi performance and we just wanted to be able to run a network line up to it (no USB webcams need apply). Doing this with a network cable tied into our building switch meant that the packets the camera generated would not negatively impact the rest of the users.
• It needed to have sufficient intelligence that we could remotely log into it to position it and/or program preset camera stops and zoom factors.
• A healthy optical zoom so we could zoom up close on the nest for an up-close experience.
• Image stabilization built-in so that when we did zoom in, any sway or vibration in the antenna pole wouldn’t give us a jittery image.
• FTP/FTPS functionality – where you can have the webcam automagically FTP a still frame to an outside server at a user-defined interval. We used this feature to amass the still shots that we used in our (award winning) time lapse videos for the Lewes wind turbine construction. (We stopped the camera from moving for the 2-3 weeks it took to complete construction.)

We selected the Sony SNC-RZ30N for the job, but before you go out hunting for one, they seem to have been discontinued. In its stead now is the SNC-RZ25N (slightly lesser 18x optical zoom than the 30N) and its replacement, the SNC-RZ50N (26x optical zoom) which does both motion JPEG and H.264 streaming. The SNC-RZ30N camera has its own built-in web server so we could control it via a web browser. It has a 25x optical zoom so we can get up close and personal with the osprey nest. Don’t be fooled by some webcams which tout a zoom without specifying that it’s an optical zoom. If it doesn’t say “optical zoom” it’s most likely a digital zoom, meaning a lower resolution subset of the total number of pixels the camera can capture.

The SNC-RZ30N supports up to 16 presets, which allows you to position the camera where you want it pointed at the zoom factor you want, and to save a “preset”. You can then have the camera cycle itself through the various presets at a user-specified panning speed, stopping at each stop for a user-specified amount of time. Quite handy when we are cycling the webcam to look at various points of interest on campus, and even handier for removing the osprey nest preset from the mix when the ospreys head south for the winter.

Sony web interface

As you can see, the webcam is pretty close to the ocean, so we needed to find an enclosure for it that could:

• Survive a salty marine environment
• Remain water-tight
• Provide space for desiccant packs to remove any excess moisture so that the inside of the enclosure didn’t fog up on cold mornings
• Provide an automatic heating of the enclosure on cold mornings to prevent frosting up of the outside dome
• Provide power for the camera inside

We chose the Dotworkz D2 Enclosure with optional heater. It has two sealable penetrations that allowed us to get power to the unit by cutting off the end of a heavy-duty outdoor extension cord, tinning the tips and tightening up the screws onto it to power the power supply and heater inside (green circle). The other end of the extension cord is plugged into a UPS/Surge Protector in the radio room below since the webcam is strapped to a huge metal pole sticking up into the (sometimes lightning filled) sky. An underground double shielded network cable was run up the tower and inserted through the second penetration – after which we crimped a RJ45 end onto it and simply plugged it into the back of the webcam. The power supply came with an end that was already compatible with the power connector on the back of the webcam (orange circle) so powering the camera was a cinch.

Enclosure interior

The enclosure also came with a magic universal mounting bracket and stand-offs of various heights to ensure you can position a compatible webcam at the right height to see out the bottom dome.

Mounting plate stand offs

Here is a picture of the connectors on the back of the webcam:

Sony back

We attached the camera as high as we could and still reach it with a scissor lift that facilities owns. The first time we installed the enclosure, we had it mounted by the pole climbers that were doing maintenance on the antennas at the top of the tower (no way I could ever do that – waaayyy too high up). We relied on the seal built into the enclosure to handle sealing out the moisture, but unfortunately it slowly started amassing some moisture inside which started pooling up inside the dome over several months. Since we didn’t have the requisite climbing gear to climb the tower, we ended up having the tower climbers move the enclosure down the pole just high enough for us to reach with the scissor lift when they came back again. We didn’t take any chances this time. We went along the exterior seam and penetrations with some marine RTV (silicone sealant) and I used some velcro tape to secure a plastic container filled with desiccant packs on top of the black mounting plate to keep the inside as dry as possible. The velcro would keep any tower vibrations from storms and the like from working the desiccant packs over the edge and down onto the dome.

Webcam on tower

We made sure to loop some additional network and power cable up the tower just in case we needed to move the enclosure to a different height or to another side of the tower. Make sure to make a “drip loop” with any cables that dips down from the enclosure and then back up away from it. This keeps water from flowing down the cable and running against the penetration, thus minimizing the likelihood of water making its way into the housing. Remember that the cables are exposed to the elements, which includes ultraviolet radiation (UV from sunlight) which can break down most plastics and vinyl cable sheathing. We selected an extension cord which listed UV resistance and selected an outdoor network cable to stave off the UV damage to the cables.

Webcam on tower closeup

One last treatment I did was to apply Rain-X to the outside of the dome. It’s like a wax coating for glass that makes water bead up and roll down the dome rather than stick to the outside and fog up your view.

WebcamXP

One last topic I’d like to cover is the use of WebcamXP as a bridge between the webcam and the outside world. The problem with most webcams is that of security and scale. The internal web server in most webcams can handle about 25-50 simultaneous users. If you have more than that number, attempts to view the feed by users 51 and up will fail. To overcome this limitation, we purchased WebcamXP as an intermediary. The software installs on a desktop or server and it makes a connection to the webcam and handles the task of streaming it to the web server that you’re embedding the feed on. By acting as the intermediary, WebcamXP offloads the streaming load from the webcam. In our case we embed a Flash SWF file on the external webserver that gets its stream from WebcamXP.

The second issue that you run into with many webcams is that of security. They have some basic security built-in, but in order to stream the video from many of them, you have to expose the ability to control and position the webcam to the end-user. The last thing we wanted was for random users repositioning the webcam. Our solution was to give the webcam an internal IP address that was not accessible from outside our border routers. The system running WebcamXP was given a publicly accessible IP address and an internal IP address so that it could access the webcam video stream and serve it up externally.

Other nice features of the software are:

• Watermarks – the software allows you to embed a watermark image over your video stream, thus branding your video with your logo and/or text.
• Ability to expose the video stream via Java, Javascript or a Flash client.
• Ability to handle multiple IP webcams simultaneously. If you want to grow the number of webcams you want to expose, you would only need one system running WebcamXP to stream the feeds from multiple webcams simultaneously.
• A free version, which can handle a single webcam. This allows you to kick the tires and make sure the software does what you want before you buy. (Note, the free version does not allow watermarking your logo on the video stream)

I had initially looked into using either Silverlight and/or the IIS Streaming Server to handle this roll, but it was early in their development when we set the webcam up and it was more expedient to use WebcamXP. I’d still like to look into having our actual web server do the work of connecting to the internal webcam and handle streaming the content using Silverlight or some other non-Flash mechanism. If you have some feedback as to how to accomplish this, I’m all ears. I think it would make a much more flexible mechanism to handle the various browsers (including mobile, iPad etc.) that are coming online.

Thanks for enduring the long post and please feel free to comment if you can think of things I missed or have any suggestions on how to improve things.

Flat Stanley joined researchers at Palmer Station in Antarctica in search of penguins and environmental data about their feeding grounds in January.  This video showcases just how awesome this icon of international literacy and community can be. Armed with only a minimal amount of training, Flat Stanley managed to pilot a REMUS Autonomous Underwater Vehicle in a precision pattern through the frigid waters off the West Antarctic Peninsula  — gathering vital information that will allow scientists to understand the feeding habits of Antarctic penguin species.

You can see a map about the many locations this worldly traveler has gone and find out more about the Flat Stanley Project on their website. Many thanks to student travel coordinators at Sierra Canyon School in Chatsworth, CA for helping Flat Stanley make his way this far south.

Awesome job Stanley!

Folks seem to like penguins….so much so that we even made the front page of the University of Delaware website! Hurray! This shot is of the Adélie penguin colony on Humble Island. We had just deployed a satellite transmitter on one of the birds so we would know where to send the underwater robots (Gliders and REMUS’s).

University of Delaware Main Page

Remnants of the storm remain in the area and wind gusts are keeping the science boats at station today. Nevertheless, we did have a break in the clouds and the sun came out. The warm sun made the Gamage glacier very active and I happened to get a great video of calving. Right place, right time.

We headed out to Biscoe Point to deploy another satellite transmitter on a penguin. The plan was remove the transmitter from a Gentoo penguin which had been at Biscoe Point since mid-night. The challenge is to find the tagged bird amongst the rest! On the way, a large amount of brash ice had surrounded Biscoe Point, so we had 1-2km if slow travel through the ice. Marc Travers (our boat driver and expert birder) did an excellent job snaking in between the large chunks. Outboard motors and large chunks of brash ice don’t mix well. Hitting a large piece of ice can leave you on a boat with a busted motor. That is why we carry an extra motor in every boat.

When we arrived at Biscoe Pt. we found that an Elephant Seal had climbed into one of the Gentoo Penguin nesting areas. If the penguin chicks are too young or unguarded by its parents, they can be easily crushed by these massive seals.

Southern Elephant Seal in Gentoo Penguin Colony overshadowed by Mt. William

Luckily it looked like the Gentoo chicks were old enough to avoid it. Occasionally a Gentoo adult would peck at the Elephant Seal’s thick blubber, but the giant beast didn’t seem to be bothered by it at all.  We made our way around the Gentoo colony looking for our tagged bird. She happened to be perched right on a rock preening herself where we could see her plain as day. The birders quickly removed the tag and she went back to her nest.

Penguin Chick Eaten by Skua Birds

Elephant Seals aside, the biggest threat to the chicks are Skua’s. These are aggressive scavenger birds swoop down and grab chicks right from their nests and make a meal out of them. There was plenty of evidence at Biscoe Pt. that the Skua birds had been active here.

Still, even with the ever present Skua, there were plenty of Gentoo chicks that were starting to look more and more like their parents. They are are starting to get their adult feathers. Their feathers are not waterproof yet, but they will be soon.

Gentoo Chick with Parent at Biscoe Pt.

The next step was downloading the dive information from the tag. This data will help us understand how deep the penguins are feeding. The dive data will help us properly analyze the data coming from the underwater Gliders and REMUS vehicles. The Birders are able to download and ready the tag for its next deployment in just a few minutes with a laptop computer in the field. These are amazing little tags.

We walked around a small bay to the neighboring Adélie Penguin colony and were able to quickly identify an Adélie penguin that would be good for carrying our satellite

Adélie Penguin packed with a satellite transmitter.

transmitter. She was quickly tagged and released back to her nest. Her two grey puffy  chicks are just to her right. We will be watching the satellite data closely to find out where she is eating. Then, we will send our underwater robots to sample that section of ocean.  In a few days the Birders will head to Biscoe Pt. again to retrieve the tag, and thank her for her contribution to science.

Our streak of excellent weather has officially come to an end with a large low pressure system in the Drake Passage.

Storm moves into Palmer Station

The weather was even tough tough for the ever-working “birders” who were going to deploy a few satellite tags on penguins today. REMUS missions are cancelled for the day. That might be good since one sprung a leak on a mission yesterday. Only the gliders are out….which makes gliders an awesome platform for ocean science when the weather gets a bit “snotty”. They don’t complain and don’t get sea-sick. The “Blue-Hen” continues is mission mapping the foraging locations of penguins when even the penguins are too scared to go out! That means I get to stay home and peel garlic (very necessary for all the amazing food here).

Garlic....it's like the best thing you can eat when it is windy

Saturday is also the day we all clean the station and have a station meeting. I got to help clean the kitchen today. That was really nice because I totally miss cleaning the kitchen at home (no, not really). We also learned that hiking on the Gamage glacier behind the station is more restricted after a new crevasse opened up. Funny story about that…..Mark Moline found it by falling into the crack. He was fine, but it was a bit un-nerving. The GSAR (Glacial Search and Rescue) team changed the boundaries after they went and uncovered the full extent of “Mark’s Crack”.

The bad weather lets us do a bit of data analysis on where the penguins are foraging. The penguins seem to be keying off of the deep canyon off of Palmer station. This has been a working hypothesis from the “birders”

Finally, I’ll leave you with an awesome moon-rise over the Gamage Glacier. Pretty awesome sight.

Moonrise over Gamage Glacier

Adélie Penguin Rookery on Humble Island

Satellite tagged Adelie Penguin

Penguin swimming tracks near Palmer Station

Ballasting the Glider (Blue Hen)

Is it possible to follow penguins from space to understand where and how they are feeding in Antarctica? Absolutely!..but not without an excellent team from University of Delaware, Rutgers University, Polar Oceans Research Group, and Cal Poly San Luis Obispo. The sequence starts with the “Birders”. The “Birders” are from Polar Ocean Research and they have been studying penguins in the West Antarctic Peninsula for years. The “Birders”, headed by Bill and Donna Fraser, head out to local rookeries to identify good penguins to tag with satellite transmitters. Finding the right breeding pair is key. The pair should have two chicks with both parents still around. Some chicks only have one parent, probably because one parent was killed by a Leopard Seal. We want to choose one of the parents, because we are pretty certain they will return to their chicks to feed them. This also helps in recovering the transmitter. If the bird does not return, the transmitter comes off during their natural annual molt cycle. Once a penguin is selected, it is gently fitted with a satellite transmitter. Special waterproof tape is used to connect the transmitter to the thick feathers on the back of the penguin. The penguins are remarkably calm during the process.  Once the tag is attached, the penguin is released back to its nest. The next part of the sequence is for the birds. The penguins head out to feed on krill and small fish in the area. Their tags relay their position information to ARGOS satellites and we get nightly updates. The Birders pass on their data to me nightly, and I filter and map the penguin tracks. I put them into Google Earth, so we can see where the penguins have been feeding. Then, through the magic of mathematics, we turn their tracks into predicted penguin densities. Based on these densities, we plan our AUV missions to intersect with the feeding penguins (Slocum Electric Gliders and REMUS AUV’s).  The first priority is to make sure the AUV’s are ballasted correctly. This means that they need to be trimmed with weights just right so they travel correctly under the water. We use small balances and scales to get the weight of the vehicle just right, then put them into ballasting tanks to make sure we did it correctly. The vehicles should hold steady just under the surface of the water.

Getting ready for the launch of the "Blue Hen" (M. Oliver and K. Coleman)

Once we have a planned mission, we head out in small zodiacs from the station to a pre-determined point. For the Gliders, we call mission control at Rutgers University (Dave, Chip, John) and let them know a glider will be in the water shortly. Once it is in, control of the glider is accomplished via satellite telephone directly to the glider. The glider calls in and reports data and position to mission control. We can see the data coming in live over the web, and in Google Earth as we navigate the vehicle to where the penguins are feeding. The gliders move by changing their ballast, which allows them to glide up and down in the water while their wings give them forward momentum. They “fly” about 0.5mph for weeks at a time!

Mark Moline with REMUS's

In contrast to the Gliders, the REMUS vehicles are very fast and are designed for shorter, 1 day missions. Daily missions are planned around the penguin foraging locations. The Cal Poly Group (Mark Moline and Ian Robbins) have been launching 2 Remus Vehicles per day to map areas the gliders can’t get too. Like the gliders, these vehicles call back via iridium to let us know how they are doing in their mission.

Glider Dances around Adélie Penguin Tracks in a sea of chlorophyll

Finally, we are getting satellite support from my lab at U.D. Erick, Megan and Danielle have been processing temperature and chlorophyll maps in near-real time to support our sampling efforts, as well as AUV operations up and down the West Antarctic Peninsula. Just today, we saw that the penguins in Avian Island (south by a few hundred miles) have been keying off of a chlorophyll front. RU05 was deployed by the L. M. Gould and will be recovered soon. All in all, it is a pretty awesome mission to track these penguins from space and AUV’s. We will see how the season develops!

Note: I will be uploading photos and videos to the ORB Lab Facebook page throughout my stay in Antarctica. Be sure to check there for my latest updates.

The West Antarctic Peninsula (WAP) is one of the most rapidly warming regions on Earth, with a 6°C temperature rise since 1950.  Glaciers are retreating and the duration and extent of sea ice has significantly decreased. Many species rely on the sea ice as a resting platform, breeding ground, protective barrier or have life histories linked to sea ice thaw and melt cycles. With the declines in sea ice, many species are having a difficult time surviving and adapting to the new warming conditions.

The food web along the WAP is short and allows energy to be transferred efficiently. Phytoplankton (tiny plants that capture energy from the sun) are ingested by zooplankton (such as krill) which are in turn eaten by penguins, seals and whales. Due to the rapid nature of the warming around Palmer Station and the short food chain, it is an ideal location to study the effects of the acute changes in a warming environment.

Palmer Station, Antarctica

In particular, Adélie penguins are experiencing significant population declines near Palmer Station, Antarctica.  On Anvers Island, populations have decreased by 70%. Declines in sea ice have also led to declines in the preferred food of Adélies.  Silverfish have nearly disappeared and krill have decreased by 80%. Currently, Adélies are having a difficult time finding a satisfying meal. In turn, many species are migrating southward to look for new places to live and better food resources. On the other hand, ice-avoiding species (Gentoo and Chinstrap penguins) have been able to move south into the Adélies home range.

Adélies are a prime vertebrate species to study in relation to a changing environment.  Tagging Adélies in summer breeding colonies with satellite-linked transmitters, allow foraging locations to be monitored. Their foraging tracks can be compared to satellite derived oceanic properties such as sea surface temperature, chlorophyll, sea-ice, and wind. Since conditions have changed so quickly over the last few decades, the recent development of satellites can easily detect these changes. The UD-134 Slocum Glider (underwater robot) will be deployed in January 2011 and 2012, to do additional surveys near breeding hotspots.  This will allow us to combine satellite data with high resolution in-situ glider data to predict how ideal foraging locations for Adélies may change as warming continues. This will also test the satellites ability to accurately describe ecological changes that are occurring along the WAP.

Adélie Penguin

The Palmer Long Term Ecological Research Program (PAL LTER) began in 1990, and investigates aspects of this polar environment while maintaining historical records for marine species.  Historical satellite data and species records will be useful in predicting phytoplankton, krill and penguin abundances and distributions.  Models will be used to predict future foraging locations of Adélies in PAL LTER region of the WAP. It is important to study this region because changes are happening faster than predicted and these changes can lead to dramatic effects in our lifetimes.

One of the highlights of going to the RVTEC meeting is getting to hear about some of the cool projects that are underway at the various institutions. One talk that caught my attention was the SUDS system, an NSF sponsored project that was given by the techs at Oregon State University.

I talked David O’Gorman and Toby Martin into doing a quick rundown on their SUDS system on camera during one of the breaks. SUDS is an acronym for the Ships Underway Data System, which consists of software and two data acquisition boards that they designed in-house – one analog and one digital. Each board can be programmed with metadata about the sensors that are attached to them. When the boards are plugged into the ships network they broadcasting XML data packets which include both data and metadata about the data via UDP for a back-end data acquisition to capture and store. For redundancy, there can be multiple acquisition systems on the network as well I’m told.

The data acquisition cards can be either powered directly or via POE (Power Over Ethernet). They can also supply power to the sensor if needed. The digital cards can accept RS232 and RS485. The analog has 4 differential input channels which can do 0-5v on two of the channels and 0-15v on the other two and range from 600Hz to 20kHz input signals.

Their website has links to a PDF of the presentation they did at the 2010 UNOLS RVTEC meeting as well as various examples of data packets that the system broadcasts. Definitely something that could be quite useful to handle the ever-changing data acquisition needs on today’s research vessels. I look forward to learning more about the SUDS system in the days to come.

RV HSBC Atlantic Explorer

Just got back from the 2010 UNOLS RVTEC meeting, which was held at the Bermuda Institute of Ocean Science (BIOS) – home of the RV HSBC Atlantic Explorer.

(Acronym Police: UNOLS = University-National Oceanographic Laboratory System and RVTEC = Research Vessel Technical Enhancement Committee).

For those unfamiliar with RVTEC, it is a committee organized around 1992 to “provide a forum for discussion among the technical support groups of the National Oceanographic Fleet” in order to “promote the scientific productivity of research programs that make use of research vessels and oceanographic facilities and to foster activities that enhance technical support for sea-going scientific programs” as listed in Annex V of the UNOLS charter. Membership is extended to UNOLS member institutions but “Participation shall be open to technical and scientific personnel at UNOLS and non-UNOLS organizations”.

The meeting agenda was pretty intense and we were pretty much straight out from Monday through Friday afternoon. There were a lot of scary smart people in the room doing some pretty amazing things in support of science operations at their respective institutions. I tried to compile a list of Tech Links on the ResearchVessels.org site to make it easier to find some of the various resources that were discussed at the meeting. I did the same thing at last years RVTEC meeting in Seattle but some additions and corrections were needed based on feedback from the members. I’m hoping that I’ll be able to obtain funding to attend next years meeting and perhaps the upcoming Inmartech meeting (look for a post on Inmartech soon).

I shot some video, made some fantastic contacts and had some interesting discussions at this years RVTEC meeting. If all goes smoothly, I’ll have a couple of new blog entries online this week to help share some of the wealth of knowledge.

I tinkered around with a demo copy of the 3DVista Stitcher and 3DVista Show 3.0 to push its capabilities a tad. I touched on the packages in a previous blog post about the Global Visualization Lab where I did a simple panorama of the room. The wheels started turning and we decided to push the envelope a little and create a series of panoramic views of the RV Hugh R Sharp as a proof of concept for an online virtual tour of a research vessel.

Click on this image to visit the proof-of-concept panorama...

The image above is a screen shot of the proof-of-concept panoramic tour we came up with. Click the image above or this hyperlink to visit the actual panoramic tour. The pane on the left shows an interactive panorama of the various points of interest on the ship. The right-hand pane shows a scan of the deck and compartment that the panorama represents. If there is no user action, the tour will cycle through a complete 360 view of each panorama and will move onto the next panorama in the list if nothing is clicked. There are two drop-d0wns to the right, one above the deck layout to select a specific panorama and one below it to select a specific panorama.

A really cool feature of the product is the ability to take the panorama full-screen for a more immersive experience. To do so, just click on the arrow button in the top-right-hand corner next to the question mark symbol. Once in full-screen mode, you can easily cycle through the various pano’s by mousing over them near the bottom of the screen.

The 3DVista Show software allows you to insert hot-spots into the panorama’s as well that can either link to other pages/sites or to include an audio clip into the mix. This makes it quite easy to include additional information about a specific area or feature. I inserted an animated arrow pointing to the Multibeam Operator Station on the Main Deck -> Multibeam Tech Area that links out to the Reson Seabat 8101 Multibeam Echosounder posting.

The mind races with the various uses for this type of technology. It allows for mobility impaired individuals and class groups to tour a space that they’d ordinarily be unable to access. It also allows scientists to “look around” and get a feel for the spaces that they’d be using when they come onboard a vessel. For a future project, I’d like to get support do some panorama’s both inside and outside of the various UNOLS lab vans that would allow scientists to virtually stand in the lab vans and walk around them to see how they’re laid out. 3D panorama’s of research sites in remote locations like the arctic and antarctic also come to mind as does tours of mineral sample and other collections with hotspots included for the various specimens for links to additional information. The application of this tech abounds.

I talked with the folks at 3DVista and it looks like they offer a 15% academic discount for the software so be sure to ask about if if you’re going to purchase it. They also list a one-shot 360 degree pano lens and adapters to make shooting the digital pics a little easier. We used a 180 degree fish-eye lens for our pano shots, which means we did 3 shots at each location 120 degrees off from one-another and stitched them together with the 3DVista Stitcher program.

Many thanks to Lisa Tossey for taking the photos and getting this project rolling. I posted this as an unpolished proof-of-concept version. I look for the ready-for-prime-time panorama that she comes up with for the CEOE site. I also look forward to seeing any cool panoramas that are out there for research projects. Be sure to share your links.